Tag: ensembl

A practical guide to loading your own whole-genome alignments, variant calls, and RNA coverage into a local genome browser, indexing the files correctly, and querying annotation programmatically instead of clicking through a web UI.

How to tell Ensembl the database from ensemble methods in bioinformatics, then use both on your own whole-genome VCF: offline VEP annotation, plugin scores, and consensus calling across pipelines.